TAP C3H in Funaria hygrometrica (Transcriptome)

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Funaria

Protein source: Szövényi et al. (2010) Mol Biol Evol 28:803


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

zf-CCCH
AP2
zf-C2H2
SRF-TF
two_or_more_Myb_DNA-binding

(Domain names are clickable)



List of proteins (103)

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m240lflr_TR10858_c0_g1_i10_5_rc
m240lflr_TR10858_c0_g1_i16_4_rc
m240lflr_TR10858_c0_g1_i19_5_rc
m240lflr_TR10858_c0_g1_i1_5_rc
m240lflr_TR10858_c0_g1_i21_4_rc
m240lflr_TR10858_c0_g1_i22_4_rc
m240lflr_TR10858_c0_g1_i2_4_rc
m240lflr_TR10858_c0_g1_i7_5_rc
m240lflr_TR11100_c0_g1_i1_13_rc
m240lflr_TR12093_c0_g1_i1_1
m240lflr_TR1219_c0_g1_i1_8_rc
m240lflr_TR12227_c0_g1_i1_1_rc
m240lflr_TR12936_c0_g1_i1_7
m240lflr_TR12936_c0_g1_i2_4
m240lflr_TR12936_c0_g1_i3_8
m240lflr_TR12936_c0_g1_i4_5
m240lflr_TR13089_c0_g1_i11_4
m240lflr_TR13089_c0_g1_i6_4
m240lflr_TR13089_c0_g1_i7_4
m240lflr_TR13089_c0_g1_i8_4
m240lflr_TR13105_c0_g1_i1_4
m240lflr_TR13105_c0_g1_i2_2
m240lflr_TR13105_c0_g1_i3_4
m240lflr_TR13105_c0_g1_i4_4
m240lflr_TR13105_c0_g1_i5_4
m240lflr_TR13105_c0_g1_i6_4
m240lflr_TR13105_c0_g1_i7_2
m240lflr_TR13284_c0_g1_i1_5_rc
m240lflr_TR13717_c0_g1_i1_6_rc
m240lflr_TR19860_c0_g2_i1_2
m240lflr_TR21920_c0_g1_i1_7_rc
m240lflr_TR21920_c0_g2_i1_6_rc
m240lflr_TR22756_c1_g5_i1_9_rc
m240lflr_TR22756_c1_g5_i2_9_rc
m240lflr_TR22756_c1_g5_i3_9_rc
m240lflr_TR22756_c1_g5_i4_9_rc
m240lflr_TR22756_c1_g5_i5_9_rc
m240lflr_TR22762_c1_g1_i11_12_rc
m240lflr_TR22762_c1_g1_i15_11_rc
m240lflr_TR22762_c1_g1_i17_23_rc
m240lflr_TR22762_c1_g1_i5_25_rc
m240lflr_TR22762_c1_g1_i6_13_rc
m240lflr_TR22762_c1_g1_i7_12_rc
m240lflr_TR22779_c0_g2_i11_4
m240lflr_TR22779_c0_g2_i12_4
m240lflr_TR22779_c0_g2_i15_6
m240lflr_TR22779_c0_g2_i16_2
m240lflr_TR22779_c0_g2_i17_4
m240lflr_TR22779_c0_g2_i18_5
m240lflr_TR22779_c0_g2_i19_4
m240lflr_TR22779_c0_g2_i1_6
m240lflr_TR22779_c0_g2_i20_4
m240lflr_TR22779_c0_g2_i2_5
m240lflr_TR22779_c0_g2_i3_4
m240lflr_TR22779_c0_g2_i4_5
m240lflr_TR22779_c0_g2_i5_5
m240lflr_TR22779_c0_g2_i6_5
m240lflr_TR22779_c0_g2_i7_5
m240lflr_TR22779_c0_g2_i8_5
m240lflr_TR22779_c0_g2_i9_2
m240lflr_TR27008_c0_g2_i1_7_rc
m240lflr_TR29133_c0_g1_i1_10_rc
m240lflr_TR29133_c0_g1_i2_10_rc
m240lflr_TR29133_c0_g1_i3_4_rc
m240lflr_TR29509_c1_g1_i1_20_rc
m240lflr_TR29509_c1_g1_i2_21_rc
m240lflr_TR29509_c1_g1_i3_20_rc
m240lflr_TR29509_c1_g1_i4_7_rc
m240lflr_TR29509_c1_g1_i5_21_rc
m240lflr_TR29509_c1_g1_i6_8_rc
m240lflr_TR29521_c0_g1_i1_4
m240lflr_TR29521_c0_g1_i2_4
m240lflr_TR29521_c0_g1_i3_6
m240lflr_TR29521_c0_g1_i4_5
m240lflr_TR29521_c0_g1_i5_5
m240lflr_TR38985_c0_g1_i1_4
m240lflr_TR38985_c0_g2_i1_2
m240lflr_TR44984_c0_g1_i1_1
m240lflr_TR44984_c0_g1_i2_1
m240lflr_TR46808_c0_g1_i1_2
m240lflr_TR48145_c1_g1_i1_1
m240lflr_TR48145_c1_g1_i2_1
m240lflr_TR48145_c1_g2_i1_2
m240lflr_TR48145_c1_g2_i2_3
m240lflr_TR48145_c1_g2_i3_2
m240lflr_TR48145_c1_g3_i1_1
m240lflr_TR48606_c0_g1_i1_2
m240lflr_TR49888_c0_g2_i1_3_rc
m240lflr_TR49888_c0_g3_i1_3_rc
m240lflr_TR51869_c0_g1_i1_24_rc
m240lflr_TR51869_c0_g1_i2_14_rc
m240lflr_TR51869_c0_g1_i3_14_rc
m240lflr_TR5276_c0_g1_i10_2
m240lflr_TR5276_c0_g1_i2_4
m240lflr_TR5276_c0_g1_i3_4
m240lflr_TR5276_c0_g1_i4_4
m240lflr_TR5276_c0_g1_i5_4
m240lflr_TR5276_c0_g1_i6_2
m240lflr_TR5276_c0_g1_i7_2
m240lflr_TR5276_c0_g1_i9_2
m240lflr_TR5934_c0_g1_i1_5
m240lflr_TR8339_c0_g1_i1_7
m240lflr_TR834_c0_g1_i1_4_rc
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum